25% off all training courses Offer ends May 8, 2026
View HIPAA Courses
25% off all training courses
View HIPAA Courses
Offer ends May 8, 2026

The HIPAA Journal is the leading provider of HIPAA training, news, regulatory updates, and independent compliance advice.

Understanding & Applying Risk Assessments

A HIPAA risk assessment for a covered entity or business associate determines whether existing policies, procedures, and security mechanisms are adequate to reduce risks and vulnerabilities to a reasonable and appropriate level.

It should include:

  • Threats to the privacy and security of PHI.
  • The likelihood of a threat occurring.
  • The potential impact of each threat.

While healthcare compliance officers are often well-versed in theoretical risk assessment needs, there is persistent difficulty in turning this into practical procedures that comprehensively protect organizations. However, the consequences of inadequate risk assessment are severe, and superficial compliance is no longer sufficient.

The Compliancy Group Risk Assessment Whitepaper addresses the compliance officer’s dilemma, detailing how healthcare organizations can transform the risk assessment process from on-paper exercises to structured protection with measurable outcomes for organizational peace of mind. It was informed by in-depth interviews with industry figures and supporting data from other thought leaders in this space. Download it now using the form on this page.

The first requirement to conduct a HIPAA risk assessment appears in the HIPAA Security Rule (45 CFR § 164.308 – Security Management Process). This standard requires covered entities and business associates to conduct an “accurate and thorough assessment of the potential risks and vulnerabilities to the confidentiality, integrity, and availability of ePHI”.

The second requirement appears in the HIPAA Breach Notification Rule (45 CFR § 164.402). This standard only applies when there has been an impermissible acquisition, access, use, or disclosure of unsecured PHI (in any format), and a HIPAA risk assessment is necessary to determine whether the event is notifiable to HHS and the affected individual(s).

However, beyond the HIPAA risk assessment requirements of the HIPAA Security and Breach Notification Rules, risks exist to the confidentiality, integrity, and availability of PHI when it is not in electronic format – for example, when unauthorized disclosures are made verbally or when a printed medical report is left unattended in an area of public access.

Because of these risks, it may be necessary to conduct a HIPAA privacy risk assessment, which not only takes into account risks to the confidentiality, integrity, and availability of non-electronic PHI, but also covers individuals’ access rights (to their PHI), Business Associate Agreements, and other Organizational Requirements of HIPAA.

HIPAA Risk Assessment Workflow- the hipaajournal.com

HIPAA Security Risk Assessment

The objective of a HIPAA security risk assessment is outlined in the General Rules (CFR 45 § 164.306) that precede the Administrative, Physical, and Technical Safeguards of the HIPAA Security Rule. These are to:

  • Ensure the confidentiality, integrity, and availability of all electronic PHI that the covered entity or business associate creates, receives, maintains, or transmits.
  • Protect against any reasonably anticipated threats or hazards to the security or integrity of such information.
  • Protect against any reasonably anticipated uses or disclosures of such information that are not permitted or required under subpart E of this part (the HIPAA Privacy Rule).
  • Ensure compliance with this subpart (the HIPAA Security Rule) by its workforce. Note: This is achieved via training and the enforcement of a sanctions policy.

With regard to the Administrative, Physical, and Technical Safeguards of the HIPAA Security Rule, the General Rules allow a “flexibility of approach” in how the standards are implemented. Despite the flexibility of approach clause, it is important that all standards are implemented unless an implementation specification is not “reasonable and appropriate” and an equivalent alternative measure is implemented in its place. The full list of Administrative, Physical, and Technical implementation specifications is:

Standards Sections Implementation Specifications

(R)=Required, (A)=Addressable

Implementation Commentary
Security Management Process 164.308(a)(1) Risk Analysis (R), Risk Management (R), Sanction Policy (R), Information System Activity Review (R) Organizations should perform a comprehensive risk analysis to identify potential vulnerabilities to ePHI. Develop and document a risk management strategy that prioritizes remediation activities. Enforce a sanction policy for employees who fail to comply with security policies, and implement tools for reviewing system activity regularly to detect any unauthorized access.
Assigned Security Responsibility 164.308(a)(2) (R) Assign a senior-level individual (such as a CISO or Privacy Officer) to be responsible for ensuring the implementation and oversight of security policies and procedures across the organization. This individual should have authority and resources to enforce HIPAA compliance.
Workforce Security 164.308(a)(3) Authorization and/or Supervision (A), Workforce Clearance Procedure (A), Termination Procedures (A) Establish and document procedures for supervising workforce members who access ePHI. Screen employees before granting access, and ensure prompt deactivation of accounts and access upon termination or role change to prevent unauthorized access.
Information Access Management 164.308(a)(4) Isolating Health Care Clearinghouse Function (R), Access Authorization (A), Access Establishment and Modification (A) Create controls to isolate systems that manage ePHI, especially if a healthcare clearinghouse is part of a larger organization. Define procedures for granting, modifying, and removing user access based on job roles. Access should be reviewed periodically and updated accordingly.
Security Awareness and Training 164.308(a)(5) Security Reminders (A), Protection from Malicious Software (A), Log-in Monitoring (A), Password Management (A) Develop a formal training program that includes regular security updates, awareness of phishing and malware threats, instructions for recognizing suspicious activities, and best practices for password management. Training should be documented and mandatory for all employees.
Security Incident Procedures 164.308(a)(6) Response and Reporting (R) Develop and maintain a written incident response plan that defines how to detect, report, and respond to security incidents. Train staff on recognizing incidents, and test the plan through simulated exercises to improve readiness.
Contingency Plan 164.308(a)(7) Data Backup Plan (R), Disaster Recovery Plan (R), Emergency Mode Operation Plan (R), Testing and Revision Procedure (A), Applications and Data Criticality Analysis (A) Implement a robust contingency planning framework that includes regular data backups, disaster recovery procedures, and emergency mode operations to ensure continuity of care. Conduct periodic testing and revise plans based on outcomes. Assess and prioritize data and application criticality to focus recovery efforts effectively.
Evaluation 164.308(a)(8) (R) Regularly evaluate your security program’s effectiveness through audits, risk assessments, and policy reviews. Document evaluation results and implement improvements as needed to address any weaknesses or evolving threats.
Business Associate Contracts 164.308(b)(1) Written Contract or Other Arrangement (R) Enter into Business Associate Agreements (BAAs) with all vendors who handle ePHI on your behalf. Ensure these agreements outline security responsibilities and establish that the associate is subject to HIPAA rules.
Facility Access Controls 164.310(a)(1) Contingency Operations (A), Facility Security Plan (A), Access Control and Validation Procedures (A), Maintenance Records (A) Implement procedures to control physical access to facilities where ePHI is stored. This includes locking doors, using ID badges, and ensuring that emergency access is planned. Document maintenance activities and control how visitors and staff are validated before entering sensitive areas.
Workstation Use 164.310(b) (R) Define appropriate uses of workstations that access ePHI. Restrict the use of unauthorized software and internet access, and place workstations in secure locations where unauthorized individuals cannot view screen content.
Workstation Security 164.310(c) (R) Physically secure workstations by using cable locks, locking office doors, and ensuring terminals are not left unattended when logged in. This helps prevent unauthorized access or tampering.
Device and Media Controls 164.310(d)(1) Disposal (R), Media re-use (R), Accountability (A), Data Backup and Storage (A) Develop policies for securely disposing of media containing ePHI, such as shredding paper records or wiping hard drives. Maintain a media tracking system to ensure accountability and store backups securely offsite or in the cloud.
Access Control 164.312(a)(1) Unique User Identification (R), Emergency Access Procedure (R), Automatic Logoff (A), Encryption and Decryption (A) Assign unique user IDs for tracking access to systems containing ePHI. Ensure emergency access is available when needed. Set automatic logoff policies to reduce risk from unattended terminals, and encrypt data both at rest and in motion where appropriate.
Audit Controls 164.312(b) (R) Use software tools that track and log all access to ePHI, including login attempts, file accesses, and modifications. Regularly audit these logs to identify unusual activity and respond to potential breaches.
Integrity 164.312(c)(1) Mechanism to Authenticate Electronic Protected Health Information (A) Use checksums, digital signatures, or similar tools to ensure that ePHI has not been altered or destroyed in an unauthorized manner. Validate these mechanisms regularly to ensure reliability and security.
Person or Entity Authentication 164.312(d) (R) Ensure users authenticate themselves before accessing ePHI using secure methods such as strong passwords, biometric verification, or multi-factor authentication. Regularly update and review authentication policies.
Transmission Security 164.312(e)(1) Integrity Controls (A), Encryption (A) Encrypt data transmissions such as emails or data sent via APIs to protect ePHI from interception. Implement integrity controls like message authentication codes to ensure that data is not altered during transmission.

The final section of the HIPAA Security Rule covers Business Associate Agreements and other Organizational Requirements. This section requires covered entities to ensure their Business Associate Agreements require business associates to comply with the HIPAA Security Rule and report any security incidents (not just data breaches) to the covered entity. With regard to the Organization Requirements, the standard in 45 CFR § 164.314 applies to group health plans; but all covered entities in hybrid, affiliated, or OHCA arrangements should review the content of this standard as well.

HIPAA Breach Risk Assessment

The second “required” HIPAA risk assessment is actually optional inasmuch as the HIPAA Breach Notification Rule states that any impermissible acquisition, access, use, or disclosure of PHI is presumed to be a breach unless a low probability of compromise can be demonstrated via a risk assessment that takes at least the following factors into account:

  • The nature and extent of breached PHI, including the types of identifiers and the likelihood of reidentification;
  • The unauthorized person (if known) who acquired, accessed, or used the breached PHI or to whom an impermissible disclosure was made;
  • Whether PHI was actually acquired or viewed (read HHS guidance on ransomware to establish what constitutes “acquired or viewed” in cyberattacks);
  • The extent to which the risk to PHI has been mitigated.

The reason for the HIPAA breach risk assessment being described as optional is that covered entities and business associates could – if they wish – skip this HIPAA risk assessment and issue notifications for every impermissible acquisition, access, use, or disclosure of PHI. The drawback to this approach is that it may result in business disruption if HHS’ Office for Civil Rights feels your organization is experiencing an above-average number of data breaches and decides to conduct a compliance review.

It can also increase legal risk and cause a loss of trust from individuals served by the organization if patients and plan members are receiving frequent breach notifications – especially if they are advised to take measures to protect themselves against fraud, theft, and loss unnecessarily because “breached” PHI has not actually been acquired or viewed. Although “optional”, it can be a good idea to conduct a HIPAA breach risk assessment to avoid unnecessary notifications.

HIPAA Privacy Risk Assessment

Due to the requirement to conduct risk assessments being in the HIPAA Security Rule, many covered entities and business associates overlook the necessity to conduct a HIPAA privacy risk assessment. A HIPAA privacy risk assessment is equally as important as a security risk assessment, but can be a much larger undertaking depending on the size of the organization and the nature of its business.

In order to complete a HIPAA privacy risk assessment, an organization should appoint a Privacy Officer, whose first task is to identify organizational workflows and get a “big picture” view of how the requirements of the HIPAA Privacy Rule impact the organization’s operations. Thereafter, the Privacy Officer needs to map the flow of PHI both internally and externally in order to conduct a gap analysis to identify where breaches may occur.

The final stage of a HIPAA privacy risk assessment should be the development and implementation of a HIPAA privacy compliance program. The program should include policies to address the risks to PHI identified in the HIPAA privacy assessment and should be reviewed as new work practices are implemented or new technology is deployed.

As required by 45 CFR § 164.530, it is essential that employees are trained on any policies and procedures developed as a result of a HIPAA privacy risk assessment and when material changes to policies and procedures impact employees’ functions. Although covered entities and business associates may comply with this requirement “to tick the box”, better trained staff make fewer HIPAA errors, so training on HIPAA policies and procedures should be embraced as a risk mitigation strategy.

Not Identifying Risks Can Be Costly

The severity of fines for non-compliance with the HIPAA Rules has historically depended on the number of patients affected by a breach of PHI and the level of negligence involved. Few fines are now issued in the lowest “Did Not Know” HIPAA violation category, because there is little excuse for not knowing a legal requirement exists to protect PHI.

More recently, the majority of fines have been under the “Willful Neglect” HIPAA violation category, where organizations knew – or should have known – that they had a responsibility to safeguard PHI. Many of the largest fines – including the $5.5 million fine issued against the Advocate Health Care Network – are attributable to organizations failing to identify where risks to the integrity of PHI exist.

However, since the start of the second round of HIPAA audits, fines have also been issued for potential breaches of PHI. These are where flaws in an organization’s security program have not been uncovered by a HIPAA risk assessment, or where no assessment has been conducted at all. In March 2016, North Memorial Health Care of Minnesota paid more than $1.5 million to settle related HIPAA violation charges.

It’s Not Just Large Organizations in the Firing Line

Although the majority of headlines relating to HIPAA violations concern large medical organizations and substantial fines for non-compliance, many small medical practices are also investigated by the Office for Civil Rights (OCR) or subject to HIPAA audits. Since 2003, OCR has received more than 300,000 reports of alleged HIPAA violations. Fewer than 2% of these relate to data breaches involving 500 individuals or more.

A significant problem for small- and medium-sized medical practices is that not all insurance carriers cover the cost of a HIPAA breach. The cost of a HIPAA breach not only includes the fine, but also the cost of hiring IT specialists to investigate the breach, repairing public confidence, issuing notifications, and providing credit monitoring services. Insurers may also limit their coverage according to the nature of the HIPAA violation and the level of negligence.

Without insurance coverage, the cost of a HIPAA breach could potentially close a small medical practice. However, this scenario can be mitigated by conducting a HIPAA risk assessment and implementing measures to resolve any uncovered issues. A risk assessment can be complicated and time-consuming, but the alternative is potentially terminal to small medical practices and their business associates.

Business Associates Must Be Included

Every covered entity that creates, receives, maintains, or transmits PHI has to conduct an accurate and thorough HIPAA risk assessment in order to comply with the Security Management requirements of the HIPAA Security Rule. This condition of HIPAA compliance not only applies to medical facilities and health plans. Business associates, subcontractors, and vendors must also conduct a HIPAA security risk assessment. Similar to covered entities, fines for non-compliance can be issued by OCR against business associates for potential breaches of PHI.

OCR treats these risks seriously. In December 2014, the agency revealed that 40% of all HIPAA breaches involving an exposure of more than 500 patient records were attributable to the negligence of business associates. In June 2016, OCR issued its first fine against a business associate, Catholic Health Care Services of the Archdiocese of Philadelphia, which agreed to pay $650,000 following a breach of 450 records. The non-profit organization had failed to conduct a HIPAA risk assessment since 2013.

More recently, the proportion of data breaches attributable to a lack of compliance by business associates may appear to have reduced, but this is not necessarily the case. Under the HIPAA Breach Notification Rule (CFR § 164.410), a business associate is required to notify a covered entity when a breach of unsecured PHI occurs. It is then the covered entity’s responsibility to notify HHS and the affected individual(s), so it may be the case that many data breaches are recorded as being attributable to a covered entity when, in fact, the business associate is at fault.

Developing a Risk Management Plan and Implementing New Procedures

A HIPAA risk assessment should reveal any areas of an organization’s security that need attention. Organizations then need to develop a risk management plan in order to address the weaknesses and vulnerabilities uncovered by the assessment and implement new procedures and policies, where necessary, to remediate the vulnerabilities most likely to result in a breach of PHI.

The risk levels assigned to each vulnerability will give an organization direction on the priority that each vulnerability needs to be given. The organization can then create a remediation plan to tackle the most critical vulnerabilities first. The remediation plan should be complemented with new procedures and policies where necessary, and appropriate workforce training and awareness programs.

It has been noted by OCR that the most frequent reason why covered entities and business associates fail HIPAA audits is because of a lack of procedures and policies or inadequate policies and procedures. It is important that the appropriate procedures and policies are implemented in order to enforce changes to the workflow that have been introduced as a result of the HIPAA risk assessment.

Tools to Assist with a HIPAA Risk Assessment

Conducting a HIPAA risk assessment on every aspect of an organization’s operations – regardless of its size – can be complex. This is particularly true for small medical practices with limited resources and no previous experience of complying with HIPAA regulations. To help reduce the complexity of conducting HIPAA risk assessments, in 2014, OCR released a downloadable Security Risk Assessment (SRA) tool that helps small- and medium-sized medical practices conduct a HIPAA risk assessment.

The SRA tool is very helpful in helping organizations identify some locations where weaknesses and vulnerabilities may exist, but not all. In the User Guide accompanying the tool, it is stated at the beginning of the document, “the SRA tool is not a guarantee of HIPAA compliance”. This is because, although the tool consists of 156 questions relating to the confidentiality, availability, and integrity of all PHI, there are no suggestions on how to assign risk levels or what policies and procedures to introduce.

Much the same applies to other third-party tools that can be found on the Internet. They may also help organizations identify some weaknesses and vulnerabilities, but not provide a fully compliant HIPAA risk assessment. Indeed, many third-party vendors publish disclaimers in the small print of their terms and conditions similar to that at the beginning of the SRA tool User Guide. The conclusion is that tools to assist with a HIPAA risk assessment can be helpful for identifying issues, but are not suitable for providing solutions to all issues.


 

The Compliancy Group Risk Assessment Whitepaper addresses the compliance officer’s dilemma, detailing how healthcare organizations can transform the risk assessment process from on-paper exercises to structured protection with measurable outcomes for organizational peace of mind. It was informed by in-depth interviews with industry figures and supporting data from other thought leaders in this space. Download it now using the form on this page.

Download the
Risk Assessment
Whitepaper now

Title: Understanding & Applying Risk Assessment Procedures in Healthcare Compliance

Please Enter Correct Email Address

Your Privacy Respected

HIPAA Journal Privacy Policy